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# CITATION file created with {cffr} R package
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cff-version: 1.2.0
message: 'To cite package "CimpleG" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'CimpleG: A Method to Identify Single CpG Sites for Classification and Deconvolution'
version: 1.0.1
doi: 10.32614/CRAN.package.CimpleG
abstract: DNA methylation signatures are usually based on multivariate approaches
  that require hundreds of sites for predictions. 'CimpleG' is a method for the detection
  of small CpG methylation signatures used for cell-type classification and deconvolution.
  'CimpleG' is time efficient and performs as well as top performing methods for cell-type
  classification of blood cells and other somatic cells, while basing its prediction
  on a single DNA methylation site per cell type (but users can also select more sites
  if they so wish). Users can train cell type classifiers ('CimpleG' based, and others)
  and directly apply these in a deconvolution of cell mixes context. Altogether, 'CimpleG'
  provides a complete computational framework for the delineation of DNAm signatures
  and cellular deconvolution. For more details see Maié et al. (2023) <https://doi.org/10.1186/s13059-023-03000-0>.
authors:
- family-names: F.V. Maié
  given-names: Tiago
  email: tiagomaie@hotmail.com
repository: https://costalab.r-universe.dev
repository-code: https://github.com/CostaLab/CimpleG
commit: 02d0a873b114df283a251ec15022204b31b7c0aa
url: https://costalab.github.io/CimpleG/
date-released: '2025-11-21'
contact:
- family-names: F.V. Maié
  given-names: Tiago
  email: tiagomaie@hotmail.com